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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs200698974 chr10:81761332 TA/T 8.55E-5 480 16.08 16.57 9.77 KM Plot
THCA rs200776255 chr1:156951006 T/A 1.26E-7 472 16.63 15.05 11.3 KM Plot
THCA rs200779182 chr16:2942993 TATATAC/T 0.00014 484 15.23 17 15.4 KM Plot
THCA rs200800391 chr14:59859270 GC/G 0.000167 484 16.33 15 5.45 KM Plot
THCA rs200833200 chr16:2955682 C/CTAGG 0.000179 484 15.3 17 15.4 KM Plot
THCA rs200865978 chr11:62608883 A/AGG 8.34E-5 490 16.23 14.17 14.27 KM Plot
THCA rs200890382 chr1:200526155 CAG/C 3.08E-10 482 15.2 20.5 9.57 KM Plot
THCA rs200910914 chr6:119165875 CT/C 0.000264 484 16.37 14.23 21.77 KM Plot
THCA rs200958173 chr1:184103088 G/C 0 475 15.68 17.6 34.1 KM Plot
THCA rs201082118 chr1:119114915 C/T 8.02E-7 488 16.07 15.9 14.57 KM Plot
THCA rs201108723 chr19:43566986 CT/C 0.000246 487 15.32 18.3 10.08 KM Plot
THCA rs201113646 chr1:156907031 CTT/TTT 1.2E-6 487 16.57 15.67 11.3 KM Plot
THCA rs201115820 chr5:1595416 C/CATA 1.02E-7 478 15.32 16.8 15.97 KM Plot
THCA rs201124359 chr20:61480516 C/CA 5.33E-5 475 15.15 17 14.55 KM Plot
THCA rs201172383 chr7:29813950 C/CTT 8.95E-5 486 16.13 15.78 12.83 KM Plot